CDS
| Accession Number | TCMCG034C15775 |
| gbkey | CDS |
| Protein Id | XP_008375800.2 |
| Location | join(13159467..13159565,13161123..13161420,13161551..13161779,13161882..13162221,13162355..13162468,13162564..13162692,13162785..13162976,13163069..13163263,13163416..13163553,13163640..13163762,13163848..13163939,13163941..13164096,13164573..13164676,13165349..13165443,13165520..13165759,13165836..13166024,13166129..13166213,13166311..13166378,13167209..13167354,13167503..13167611,13167745..13167891,13168009..13168056,13168129..13168257,13168379..13168594,13168732..13168848,13168988..13169073,13169155..13169260,13170420..13170515,13170796..13170948,13171346..13171519,13171605..13171825,13171922..13172057,13172134..13172259,13172476..13172520,13172734..13172811,13172946..13173062,13173409..13173535,13173622..13173722,13173798..13173935,13174011..13174094,13174468..13174614,13174697..13174828,13174909..13174938,13175065..13175211,13175291..13175352,13175841..13175994,13176093..13176284,13176382..13176486,13176702..13176836,13176981..13177214,13177378..13177482,13177575..13177633,13177635..13177722) |
| Gene | LOC103439027 |
| GeneID | 103439027 |
| Organism | Malus domestica |
Protein
| Length | 2393aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA534520 |
| db_source | XM_008377578.3 |
| Definition | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1 [Malus domestica] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | CCR4-NOT transcription complex subunit |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGCTCAATTTTACGCCGACCACCGCGAGCCAGATTCGCTTCCTACTCCAGAGCCTCAACGATGCCAACTCGGACTCCGTTCTCCGAGAGCTCTCTCAGTTTACTGAACATGGACTTGAGGGAAGCATTTTGCTGCTACAGACCTGTCTGGATCATCTCACTAATTACAGAACAGACTTAAAGAGCGCAGCATTGGAACGAGTTCTTGCCTCAATTTTCAAATATCTCCTTGACAAACCTAATTTCAGTACGGTGTTTTGTGAGTGCCTAAGAAATATAGAGATTAATGAAGGAATTCTTGAGAATTTCTCTAATGCATTACTCCTGTCTGTATCGGAGAAAATTAGCATTGCTCTTGCGCTGTCAGATTCCGAAGACCTAGACACCAGGATATGTGGCAAGAACTTCTGTATGGATCAGATCCAGAAATTGTGTGAAAGTCCTATTGCTATGAATTCGTCTGAGCAAATTCAGAACATTGTTATATTCCTCCAGCGGTCTGAGGGCCGTTCCAAGCATGTGGATTCCTTTATGCAGATGTTATCTTTACTGCAGCCGAAAGATGACAGTTTTTCTGTTTTAACTCCATTGCTTTCAGATGAGCTCCGTGATGCCAATTTTTTGAGCAATGTGGGTTTGTTGCATGAAAGCGGAGAAAATGATTTTGATGCTATTTTAGCTGAAATGGCGAAAGAAATCAGCATGGGAGATGTAATGAAGGAATTAGGTTATGGATGCACAGTTGATTCATCTCAGTGCAAAGAGATTTTATCTCTTTTCTTACCACTCACTGAGATTACTATTTCAAAAATACTTGGCATGATTGCCTCTACTCATGTTGGTCTCGAGGACAATCAGAATGCATTTTCAACATTCCGGTTGGCGGTTGGTAACAGCACTCTATCTGATCTGCCTATGTTGAACACCTGGAATATTGATGTCCTTGTAGATACAATCAAGCAACTTGCTCCCGGTACTAACTGGATACAAGTTATTGAAAATTTGGATCATGAGGGATTCTTCATTCCTAATCAGGACGCATTCTCTTTTTTCATGTCTGTATATCAGCATGTGTGTCAGGAGCCGTTCCCCCTCCATGTTATCTGTGGGTCTGTTTGGAAGAACACCGAGGGTCAGCTATCCTTCCTTAAACATGCTGTGTCAGCACCACCTGAAGTGTTTACCTTTGCCCACTCTGTTAGGCAGCTGGCCTATATTGATGCAGTGCATGGCCATAAGCTTGAACTTGGACATGCAAATCATGCATGGTTGAGTCTTGACCTTTTGGATGTACTGTGTCTACTAGCTGAGAGGGGTCATGCTCTTGCTGTTCGATCGATGCTTGAGTATCCTCTTAAACACTGTCCTGAAGTCCTGCTTCTTGGGATGGCGCATACAAATACTGCTTATAACCTGCTGCAATATGAAGTGTCTTTTACTGTTTTCCCCATGATGGTAAAAAATGCCATGGGCATTGGCATGATTAACCACCTTTGGCATATTAACACCTCACTGGTGCTGCGGGGATTTGTGGATGCTCACAATTGTGATCCAGATAGCATAGCTAGAATATTGGATATCTGTCAAGAGCTAAAGATTCTGTCATCTGTCCTGGAGATGATCCCTTCCTCTTTAAGTATCAGATTAGCAGCCCTTGCTTCTAAAAAAGAGCTTATAGACCTTGAGAAGTGGTTGACTAATAATTTGAATACGTATAAGGATACTTTCTTTGAGGAGTGCGTAAAGTTCTTGAAGGAGATTCAATTTGGTGGTTCACAGGATTTTAACACCAGACCTTTCCAACATTCTGGTGCCGTGTCTAATATTTATGTGGACACTGCTACTATCTTCACGAAGGTTCTTAAAGCTCATGTTGGCTTGGTTGCCTCTAGCCAACTTACTGAGGAGATGGAAAGGTTGTCTGTAACAATTATGGATTCGATTCCAAGCCCGAATGGTGGCACTACAGAGTCTTCAACTGATGGATATGCAGATGATATTGAAGCTGAAGCAAACTCTTACTTCCATCAAATGTTTTCTGGTCAATTGACAATTGATTCAATGGTCCAAATGCTTGCCCGATTCAAGGAATCTTCTGTAAAAAGGGAACAGTCAATTTTTGAGTGTATGATTGCAAATCTGTTTGAAGAGTATAGATTCTTCCCCAAGTATCCTGAAAGACAGCTCAAAATTGCTGCAGTTCTGTTTGGCTCTGTCATCAAGCACCAGCTCGTAACTCATCTGACTCTTGGGATTGCTCTGCGTGGAGTTTTAGATGCATTGCGCAAACCTGCAGATTCAAAAATGTTTGTGTTCGGAACTAAGGCCTTGGAGCAGTTTGTGGATCGTCTGATTGAGTGGCCGCAGTATTGCAATCATATTCTTCAAATATCCCATCTGCGGAGTACTCATTCAGAGCTTGTGGCTTTCATTGAACAGGCTCTTGCCAAGATTTCTTCAAGCCATTCAGACTCGGATGGAAGTAACCATGCTTCTGCTGCTCATCACCATGGTCCCAGTCAAGCTACCCCAGGAAATGTGGAGTTAAATGGTTCTACCATCTTACATACCGGGCAACAACATTCTTCTCCACTCCAACTTCAACAGAGACATGAAGGTTCTCTTGATGACCGTCATAAACCCTCAAATTTATCAAATGACATAAAGCCACCTTTATCTTCTGCTGTGCAACCTCCGGTTGGTCCTGTAGGCGATGCTCCTCGCATTCAGAAGTCACAAAGTGCACTCAGTGCTCCGGCAATGTTGTCTTCTCCTTCCCCTGGTTTCGTTCGTCCTACACGAGGAGTTACTTCTACCAGGTTTGGCTCTGCTTTGAATATTGAAACATTAGTTGCTGCTGCTGAGAAAAGAGATACTCTCATTGAGGCTCCAGCATCAGAGATTCAGGACAAGATATCATTTATAATTAATAATATTTCAGTTGCCAATGTTGAAGCTAAGTCAAAGGAGTTTGCTGAAATAATGAAAGAGCAGTACTATCCTTGGTTTGCACAGTATATGGTTATGAAAAGGGCAAGCATTGAGCCGAATTTTCATGATTTGTACCTGAAATTTCTGGACAAAGTTAATTCTAAGGGTTTGAATAAGGAGATTGTTCAAGCCACTTATGAGAACTGCAAGGTTCTTCTTGGATCTGAGCTTATAAAGTCAAGCGCAGAAGAGCGTTCGTTGCTTAAAAATTTAGGTAGCTGGCTTGGGAAGCTTACAATTGGAAGGAATCAAGTCTTAAGGGCTCGGGAAATAGATCCCAAATCTTTGATTATAGAGGCATATGAGAAAGGGTTGATGATTGCAGTTATACCCTTTACTTCAAAGATTCTGGAGCCATGCCAAAGTAGCTTGGCATATCAGCCACCAAATCCTTGGACAATGGGTATTCTTGGACTACTTGCTGAGATATATTCAATGCCAAACTTGAAAATGAACCTGAAGTTTGACATCGAGGTTCTATTCAAGAACCTTGGTGTGGATTTGAAGGAGATAACCCCAAGTTCTCTACTCAAGGACCGGAACAGAGAAGTTGAAGGGAATCCTGATTTCTCTAACAAAGATATTGGAGCACCCCAACCACAGATGGTTGCCGAAGTGAAACTAAATCAAGTTGAACTACCAGTTGATGTTGCTCCATCTAATTCTGCAAGCCATACACATATATCTCAGTATGCGACCCCTGTTCATGTTTCACCTGGAACCTTAATCGAGGATGAAAAGGTGTTTCCTGATCAGATTCCTGCTCAAGGACTGTTACCAGCTACTCCATCCCAGTCACCATTCTCTCTTCCCACACCAATATCTAATATTGCAACTCACGTGGTTATCAACCCGAAACTCAGTGCTTTGGGATTGCACTTGCATTTTCAGAGGGTGGTTCCAATTGCAATGGACAGAGCTATCAAAGAGATAGTAACTGGTATTGTTCAGCGCAGTGTTTCTATAGCTACGCAGACAACTAAAGAGCTTGTCTTAAAGGATTATGCCATGGAATCTGATGAGACAAGAATATTACTGGCAGCTCACTTGATGGTTGCAAGTTTGGCAGGAAGTCTAGCTCATGTAACTTGCAAGGAACCCTTGCGTAGTTCAATATCAACCCAGCTGCGGAATTCCCTTCAGGGATTAAATATTCCAAATGATCATCTGGAACATGCTGTACAACTTGTTACTAATGACAATCTGGATCTTGGCTGTGCAATCATTGAACAGTCTGCTACTGATAAGGCAGTACAAACAATTGATGGAGAAATAGCTCAACAACTTTCATTAAGAAGGAAGAGGGAAGGTGCGGGTACAACGTTTTTTGATGCTACCATGTATACACAAGGAGGCAGTGTGCCCGAGTCCCTTCGCCCAAAACCTGGTCATTTGTCCATTTCTCAACAACGAGTTTATGAGGACTTTGTGCGGCTTCCCTGGCAAAACCAGTCTAGCCAGAATTCGCATGTTCTTCCTGCTAGTACTGCAGCTACATCTGCAAGTGCAGGTCTAAATAGCACGTTTGGTTCAGCCTCGGCTCAAATTAACCCAGGCTTCTCAGCAGGCCCCGGAAGCAAATTTGATGCTGTTTCTCGTCCACTGGATGAGGCGATTGAATCCAATCCAGCTCTGCATCCAAGTGCATCCTCTATTAATGTTGGAGCGGGTGATGGTGTTTCCCAGCATAGTTCTGAGAATGATTCTGTCATTGGTTCATTTCCATCTGCTGCTTCTGCCCTAGAGCTGCAATCAGTAGAGTCATCTGATACTATACAGGAGTCTGGAATTTCTTCACAGCCGCAACCATCACCTACTGTAACTGAACGTCTGGCAAGCAACATATCAGAACCTTCTCTCAATACGAGGGATGCATTGGATAAATACCAGATTGTTTCACAGAAGCTTGAAGCTTTGGTAACCAACGATGCTAGAGAGTTAGAAATTCAGGGAGTAATTGGTGAAGTTCCTGAAATTATACTCAGGTGTGTTAGTCGAGATGAGGCTGCCTTGGCTGTGGCTCAAAAGGTTTTCAAGGGTTTATACGAAAATGCATCGAACCATACTCATGTCAGTGCTCATATTGCAATGCTGACAGCTATTCGCGATGTTTGCAAGCTTGTTGTTAAGGAGCTCACTAGTTGGGTTATTTATTCGGATGAGGAGCGGAAGTTTAACAAAGATATTACTGTTGGCCTCATTCACAGTGAATTGCTAAATCTTGCAGAGTACAATGTTCAAATGGCAAAACTTATTGATGGGGGCAGAAATAAGCCTGCAACTGAGTTTTCAATTTCCCTTCTCCAATCTTTGGTGATTGAAGAATCTAAAGTTATATCAGAACTTCATAATCTTGTTGACGCATTGGCAAAGCTCGCTGCAAAGCCTGGATCTCCGGAGTCGCTACAGCAGCTGGTTGAAATGGTAAAGAATCCTGCTTATATTCTTGGTGCGCCATCTGCTATTAATGTAGGAAAAGAGGACAAAGCCAGAATATCTAAAGATAAAAAGGCTTCTGTTCACTCTCCAGTGAGCAGGGAAGACTTTGGTAGTGTGGAGTCTGTCGAACCAGATCCTGCTGGATTCCGTGAGCAGGTGTCTATGCTGTTTGCAGAGTGGTACCGGATTTGCGAACTTCCTGGTGCAAACGATGCAGCTTGTGCCCATTTTATCTTGCAGTTGCATCAAAATGGTCTACTGAAGGGGGATGATATGACAGACCGGTTTTTCCGTGTCCTCACAGAGCTATCTGTTGCACATTGCTTATCTTCTGAGATGACAATTCCAAGCTCACTGCAAACACCTCAACAAGTGCAGAATCTCTCCTTCCTTGCTATTGATATTTATGCTAAACTTGTCTTCTTAATTTTGAAGGGATCAAGTAAACTATTTCTCTTGTCTAAGATTTTGGCAGTCACAGTGAGATTCATTCAAAAGGATGCAGAGGAGAAGAAAACATCTTTCAATCCAAGACCGTATTTTAGATTGTTTGTTAACTGGCTTCTAGACCTTGGTTCTTTGGATCCTGTGATTGATGGTGCTAACTTTCAGATATTGACAGCATTTGCAAATGCATTTCATGCTTTGCAGCCCCTTAAGGTTCCTACGTTCAGCTTTGCATGGCTTGAGTTGGTGAGTCATAGGAGCTTCATGCCAAAAATGCTTGTTGGAAATGGTCAGAAGGGTTGGCCCTATATCCAACGTTTGCTGGTACATTTGTTTCAATTTATGGAGCCATTTTTGAGGAATGCTGAACTTGGAGTTCCGGTTCATTTCATGTATAAAGGCACACTTAGGGTGCTTCTAGTGCTACTTCATGATTTCCCGGAGTTCCTTTGTGATTATCATTTTACTTTCTGTGATGTAATCCCTCCAAGCTGCATTCAAATGCGAAATATCATCCTCAGTGCATTTCCCCGTAATATGAGGCTACCAGATCCATCTACTCCCAATTTAAAGATCGATTTGCTTGCAGAAATCAGTCAGTCTCCACGTATTCTTTCCGAGGTTGATGCAGCTCTAAAAGCGAAGCAGATGAAAGCTGATGTGGATGAGTATCTCAAGACAAGGCAACAGGGTTCTTCATTTCTGACTGAACTGAAGCAAAAGTTGCTCCTTTTACCAAGCGAGGTTGCCTCAGCTGGTACTCGTTACAATGTACCCCTGATCAACTCCCTTGTGCTTTATGTTGGGATGCAGGCTATCCAGCAGCTTCAGGCTAGAACGCCTCATGCGCAATCTACCCAAACTGTTCCATTGACTGTCTATTTGGTGGGTGCGGCTTTGGATATTTTTCAGACTCTGATAGTGGACCTAGATACTGAAGGGCGCTACCTTTTCCTAAATGCGATCGCGAACCAACTGCGTTATCCAAACACCCATACCCATTACTTTTCTTTCATTGTTTTGTACTTGTTTGCTGAATCAAACCAGCATGAAATTATCCAGGAGCAAATCACAAGGGTATTGTTGGAACGTCTGATTGTCAACCGGCCTCATCCATGGGGTCTTCTAATTACCTTCATTGAGCTTATCAAGAATCCGAGATACCAGTTCTGGAACCGAGCTTTCATCAGATGTGCGCCAGAGATTGAAAACTTTGAATCTGTCTCAAGGTCTTGCGGGGGACCAAAACCAGTGGACGAAAGTATGGTCTCAGGTTGGGTATCGGAGAGTGCCCACTAA |
| Protein: MLNFTPTTASQIRFLLQSLNDANSDSVLRELSQFTEHGLEGSILLLQTCLDHLTNYRTDLKSAALERVLASIFKYLLDKPNFSTVFCECLRNIEINEGILENFSNALLLSVSEKISIALALSDSEDLDTRICGKNFCMDQIQKLCESPIAMNSSEQIQNIVIFLQRSEGRSKHVDSFMQMLSLLQPKDDSFSVLTPLLSDELRDANFLSNVGLLHESGENDFDAILAEMAKEISMGDVMKELGYGCTVDSSQCKEILSLFLPLTEITISKILGMIASTHVGLEDNQNAFSTFRLAVGNSTLSDLPMLNTWNIDVLVDTIKQLAPGTNWIQVIENLDHEGFFIPNQDAFSFFMSVYQHVCQEPFPLHVICGSVWKNTEGQLSFLKHAVSAPPEVFTFAHSVRQLAYIDAVHGHKLELGHANHAWLSLDLLDVLCLLAERGHALAVRSMLEYPLKHCPEVLLLGMAHTNTAYNLLQYEVSFTVFPMMVKNAMGIGMINHLWHINTSLVLRGFVDAHNCDPDSIARILDICQELKILSSVLEMIPSSLSIRLAALASKKELIDLEKWLTNNLNTYKDTFFEECVKFLKEIQFGGSQDFNTRPFQHSGAVSNIYVDTATIFTKVLKAHVGLVASSQLTEEMERLSVTIMDSIPRXPNGGTTESSTDGYADDIEAEANSYFHQMFSGQLTIDSMVQMLARFKESSVKREQSIFECMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHSELVAFIEQALAKISSSHSDSDGSNHASAAHHHGPSQATPGNVELNGSTILHTGQQHSSPLQLQQRHEGSLDDRHKPSNLSNDIKPPLSSAVQPPVGPVGDAPRIQKSQSALSAPAMLSSPSPGFVRPTRGVTSTRFGSALNIETLVAAAEKRDTLIEAPASEIQDKISFIINNISVANVEAKSKEFAEIMKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKGLNKEIVQATYENCKVLLGSELIKSSAEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDLKEITPSSLLKDRNREVEGNPDFSNKDIGAPQPQMVAEVKLNQVELPVDVAPSNSASHTHISQYATPVHVSPGTLIEDEKVFPDQIPAQGLLPATPSQSPFSLPTPISNIATHVVINPKLSALGLHLHFQRVVPIAMDRAIKEIVTGIVQRSVSIATQTTKELVLKDYAMESDETRILLAAHLMVASLAGSLAHVTCKEPLRSSISTQLRNSLQGLNIPNDHLEHAVQLVTNDNLDLGCAIIEQSATDKAVQTIDGEIAQQLSLRRKREGAGTTFFDATMYTQGGSVPESLRPKPGHLSISQQRVYEDFVRLPWQNQSSQNSHVLPASTAATSASAGLNSTFGSASAQINPGFSAGPGSKFDAVSRPLDEAIESNPALHPSASSINVGAGDGVSQHSSENDSVIGSFPSAASALELQSVESSDTIQESGISSQPQPSPTVTERLASNISEPSLNTRDALDKYQIVSQKLEALVTNDARELEIQGVIGEVPEIILRCVSRDEAALAVAQKVFKGLYENASNHTHVSAHIAMLTAIRDVCKLVVKELTSWVIYSDEERKFNKDITVGLIHSELLNLAEYNVQMAKLIDGGRNKPATEFSISLLQSLVIEESKVISELHNLVDALAKLAAKPGSPESLQQLVEMVKNPAYILGAPSAINVGKEDKARISKDKKASVHSPVSREDFGSVESVEPDPAGFREQVSMLFAEWYRICELPGANDAACAHFILQLHQNGLLKGDDMTDRFFRVLTELSVAHCLSSEMTIPSSLQTPQQVQNLSFLAIDIYAKLVFLILKGSSKLFLLSKILAVTVRFIQKDAEEKKTSFNPRPYFRLFVNWLLDLGSLDPVIDGANFQILTAFANAFHALQPLKVPTFSFAWLELVSHRSFMPKMLVGNGQKGWPYIQRLLVHLFQFMEPFLRNAELGVPVHFMYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQMKADVDEYLKTRQQGSSFLTELKQKLLLLPSEVASAGTRYNVPLINSLVLYVGMQAIQQLQARTPHAQSTQTVPLTVYLVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTHTHYFSFIVLYLFAESNQHEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYQFWNRAFIRCAPEIEKXFESVSRSCGGPKPVDESMVSGWVSESAH |